Information for 6-TCATTGGGCTGCT (Motif 13)

A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
Reverse Opposite:
C G T A C T A G G T A C C G T A A C T G A G T C G A T C G T A C G T C A C T G A A C G T A C T G C G T A
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.783
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif32.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.4 +/- 26.1bp
Average Position of motif in Background40.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EN2/MA0642.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATTGGGCTGCT
GNTAATTGGN-----
 A C G T A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TCATTGGGCTGCT
NNNNGTTGATTGGGTCG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGGCTGCT
NTAATTGG------
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGGCTGCT
NTAATTGG------
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

LHX9/MA0701.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGGCTGCT
NTAATTGN------
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A G C T G A C T T G C A C G T A A C G T C A G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TCATTGGGCTGCT
------NGCTN--
 A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTGGGCTGCT
ANCGCTAATTGGTCTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C A C G T

LBX2/MA0699.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCATTGGGCTGCT
NNTAATTGGN-----
 A C G T A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C A C G T A C G T A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGGCTGCT
NTAATTGN------
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGGCTGCT
NTAATTGN------
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G C T A G C T A G G T A C A C G T A C T G A G T C G A C T
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T