Information for 9-CTGGCTGGTA (Motif 8)

G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C G T A C C G T A C T A G A G T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.911
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.8 +/- 20.2bp
Average Position of motif in Background43.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGGCTGGTA-
CGTGGGTGGTCC
 A C G T G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGTA
TWGTCTGV--
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGTA
CTGTCTGG--
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCTGGTA----
NGTAGGTTGGCATNNN
 A C G T A C G T G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCTGGTA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGGCTGGTA
GGTCTGGCAT---
 A C G T A C G T A C G T G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGGTA-
--GGTTGGCAT
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGGTA
--NGCTN---
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGTA
TTGGCA----
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGTA
CWGGCGGGAA
 G T A C A C G T A C T G A C T G A G T C A C G T A C T G C T A G A C G T C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A