Information for 6-CCAGTGTSTGKTT (Motif 5)

A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A G T A C A G T C C G T A A T C G C G T A A G T C C G T A G T A C A C G T A C T G T A C G
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.7 +/- 10.2bp
Average Position of motif in Background55.6 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGTSTGKTT
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGTSTGKTT---
NNTNNTGTCTGGNNTNG
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAGTGTSTGKTT
CCATTGTTYB---
 A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGTSTGKTT--
NNGCGTGTGTGCNGCN
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTGTSTGKTT
NNNCCATTGTGTNAN-
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCAGTGTSTGKTT-
---GTCTGTGGTTT
 A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCAGTGTSTGKTT
---CTGTCTGG--
 A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCAGTGTSTGKTT-
----NNTGTGGTTT
 A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCAGTGTSTGKTT--
---NNHTGTGGTTWN
 A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGTSTGKTT
NCCATTGTTY----
 A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A T G C A C G T A C T G A C T G A C G T A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T