Information for 9-CAGCCCYRGWGGR (Motif 18)

G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G T A A G T C A G C T C T G A A C T G A C T G A C T G A T G C C G A T A C T G
p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.788
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.6 +/- 28.6bp
Average Position of motif in Background55.9 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCCCYRGWGGR-
CACCCCCGGGGGGG
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGCCCYRGWGGR-
--TCCCCTGGGGAC
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGCCCYRGWGGR-
-TGCCCTGAGGGCA
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGCCCYRGWGGR-
-TGCCCTNAGGGCA
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCCCYRGWGGR-
-TGCCCTGAGGGCA
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCYRGWGGR-
ACCCCCCCGGGGGGN
 A C G T G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCCYRGWGGR--
CCCCCCCGGGGGGGT
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCCCYRGWGGR
CAGCC--------
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGCCCYRGWGGR
-TGCCCNGGGGCA
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGCCCYRGWGGR
-AGGCCTNG----
 G T A C C G T A A T C G A G T C A G T C G T A C A G C T C T G A A C T G C G A T C T A G C T A G C T G A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T