Information for 5-GCCATGAAGT (Motif 15)

A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
Reverse Opposite:
T G C A A T G C A C G T A G C T A G T C G T C A C G A T C T A G A T C G A G T C
p-value:1e-7
log p-value:-1.833e+01
Information Content per bp:1.850
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif133.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets53.1 +/- 19.9bp
Average Position of motif in Background46.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCATGAAGT-
-ACAGGAAGTG
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T A C G T
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCATGAAGT-
-ACAGGAAGTG
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T A C G T
A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCATGAAGT
GGCCATTAAC-
 A C G T A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCCATGAAGT
----NGAAGC
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCATGAAGT
AAGCCATAAAA-
 A C G T A C G T A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCATGAAGT
ANCAGGAAGT
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCATGAAGT
CCTTTGAWGT
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCATGAAGT
AVCAGGAAGT
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGAAGT-
NNTNTCATGAATGT
 A C G T A C G T A C G T A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCCATGAAGT
----TGACGT
 A C T G A T G C A G T C G C T A A C G T A C T G C T G A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T