Information for 4-GGACAGVGGCCCA (Motif 13)

C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
Reverse Opposite:
C G A T A C T G C A T G A C T G G A T C A T G C A G C T A G T C A C G T A C T G A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.784
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.5 +/- 16.2bp
Average Position of motif in Background55.4 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGACAGVGGCCCA
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGACAGVGGCCCA-
----TGGGGCCCAC
 C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGACAGVGGCCCA
AGCAACAGCCGCACC
 A C G T A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGVGGCCCA
NAGGTCANTGACCT-
 A C G T A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGACAGVGGCCCA
-CACAGN------
 C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGACAGVGGCCCA
GGTTAGAGACCT-
 C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGACAGVGGCCCA
TTGACAGC------
 A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGACAGVGGCCCA
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.52
Offset:-11
Orientation:forward strand
Alignment:-----------GGACAGVGGCCCA
TTCAGCACCATGGACAGCGCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGACAGVGGCCCA
TTGACAGG------
 A C G T C T A G A C T G G T C A G T A C C G T A A C T G T C G A A T C G C A T G A G T C G A T C G T A C C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T