Information for 4-GGTCACGTCA (Motif 12)

A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A
Reverse Opposite:
C A G T A T C G C T G A A G T C A C T G A C G T A C T G C G T A A T G C G T A C
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.871
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif70.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.5 +/- 28.1bp
Average Position of motif in Background51.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGTCACGTCA
CCGGTCACGTGA
 A C G T A C G T A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GGTCACGTCA-
-GTCACGTGAC
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GGTCACGTCA-
BRGTCACGTGAC
 A C G T A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGTCACGTCA
GGTCACGTGC
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGTCACGTCA-
GGTCACGTGGC
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGTCACGTCA-
-GTCACGTGAT
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGTCACGTCA-
-GTCACGTGAT
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:8
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCACGTCA-------
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGTCACGTCA
GGTCACGTGA
 A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGTCACGTCA-
CGGTGACGTCAC
 A C G T A C T G A T C G A C G T A G T C C G T A A G T C A C T G A G C T A T G C G T C A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C