Information for 3-CACAGVACTCBGM (Motif 10)

T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
Reverse Opposite:
A C G T G A T C T C G A T A C G C T G A A T C G C G A T A G C T A G T C C G A T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.639
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets46.4 +/- 23.2bp
Average Position of motif in Background49.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACAGVACTCBGM
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGVACTCBGM
CACAGN-------
 T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACAGVACTCBGM-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACAGVACTCBGM
--AAGCACTTAA-
 T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACAGVACTCBGM-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CACAGVACTCBGM
--MRSCACTYAA-
 T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACAGVACTCBGM--
NTNNNAGGAGTCTCNTN
 A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CACAGVACTCBGM
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACAGVACTCBGM
-NCTGGAATGC--
 T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A
A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACAGVACTCBGM--
TACTAAGTACTTAAATG
 A C G T A C G T T G A C G T C A T G A C C G T A C T A G T C G A C G T A T A G C A G C T A T G C A G C T C T A G T G C A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G