Information for 1-CBAGGGBVCTCCGCAG (Motif 1)

A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G G T A C A C T G C T A G C T G A A C T G A T C G T A G C A G T C A G T C A G T C A C G T T G A C C T A G
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 18.1bp
Average Position of motif in Background73.6 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CBAGGGBVCTCCGCAG
TTGGGGGCGCCCCTAG-
 A C G T A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CBAGGGBVCTCCGCAG
-NRRGGGTCTT-----
 A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CBAGGGBVCTCCGCAG
NNAGGGACAAGGGCNC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CBAGGGBVCTCCGCAG
TCCCCTGGGGAC-------
 A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CBAGGGBVCTCCGCAG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CBAGGGBVCTCCGCAG-
---GGGGCCCAAGGGGG
 A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CBAGGGBVCTCCGCAG
--AGGGGAATCCCCT-
 A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CBAGGGBVCTCCGCAG
--AGGGGAATCCCCT-
 A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CBAGGGBVCTCCGCAG
TGTCAGGGGGCG------
 A C G T A C G T A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CBAGGGBVCTCCGCAG----
--------CACAGCAGGGGG
 A G T C A C T G C G T A A C T G A C T G A C T G A C T G T A G C A G T C A G C T A G T C T G A C A C T G A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G