Information for 2-CAGGCCTGGCTCCCRG (Motif 9)

A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
Reverse Opposite:
G T A C G A C T A T C G A C T G A C T G C G T A T C A G A G T C A G T C C G T A A C T G A C T G A G T C G T A C A C G T A C T G
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 19.7bp
Average Position of motif in Background54.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTGGCTCCCRG
CAGGCCNNGGCCNN--
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGCTCCCRG
-AGGCCTAG-------
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGCTCCCRG
-AGGCCTNG-------
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCTGGCTCCCRG
GTCATGCHTGRCTGS---
 A C G T A C G T A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CAGGCCTGGCTCCCRG
--------GCTCCG--
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGCCTGGCTCCCRG-
--TGCCTGCGYCMCCTT
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCCTGGCTCCCRG
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGGCCTGGCTCCCRG
GAGCCCTTGTCCCTAA
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAGGCCTGGCTCCCRG
--TGGCAGNCTGCCAG
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGCTCCCRG
-TACCCTAGTTACCGA
 A G T C G T C A A C T G A C T G G T A C A G T C C G A T C T A G A C T G A G T C A C G T A G T C G T A C A T G C C T A G A C T G
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A