Information for 5-GAGCGAGGAAAGV (Motif 5)

A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
Reverse Opposite:
A G T C A G T C C G A T A C G T A G C T A G T C A G T C A G C T A G T C C A T G T G A C A C G T T G A C
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.741
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets49.2 +/- 30.7bp
Average Position of motif in Background54.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGCGAGGAAAGV
---AGAGGAA---
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGCGAGGAAAGV
---TRAGGTCA--
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV
--GGGAGGACNG-
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV
-----TGGAAAA-
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV-
--NDCAGGAARTNN
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCGAGGAAAGV
TTGACCGAGAATTCC
 A C G T A C G T A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGCGAGGAAAGV
--CCAGGAACAG-
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV
--NACAGGAAAT-
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV
TGGCGGGAAAHB-
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGCGAGGAAAGV
---NNTGGAAANN
 A C T G T G C A A C T G G T A C A C T G C T G A C T A G C T A G C T G A T G C A C G T A C T A G T C A G
A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T