Information for 3-TGGGTTGCGTGCG (Motif 3)

A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G
Reverse Opposite:
A G T C T C A G A G T C G T C A A G T C C T A G G T A C C G T A C G T A A G T C A G T C A G T C T C G A
p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.904
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.9 +/- 16.4bp
Average Position of motif in Background58.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG-
----TTGCGTGCVA
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGGGTTGCGTGCG
-----TGCGTG--
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG---
NNNNTTGTGTGCTTNN
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGGGTTGCGTGCG--
-----TGCGTGGGYG
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG---
NNGCGTGTGTGCNGCN
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG---
-----TGCGTGGGCGT
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGGGTTGCGTGCG
-----TACGTGCV
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG
--GGGTACGTGC-
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG
---NNCGCGTGNN
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGGTTGCGTGCG-----
---ANTGCGTGGGCGTNN
 A G C T A C T G A C T G A C T G A C G T A C G T C A T G A G T C A C T G A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G