Information for 3-AAGCTAACCG (Motif 13)

C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G
Reverse Opposite:
A G T C C T A G A T C G A G C T A C G T C G T A A T C G A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.1 +/- 21.3bp
Average Position of motif in Background56.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAGCTAACCG---
---NHAACBGYYV
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AAGCTAACCG---
-----AACCGANA
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGCTAACCG
AAGCTTG---
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGCTAACCG--
----YAACBGCC
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGCTAACCG--
--GCTAAACGGT
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAGCTAACCG---
---CCAACTGCCA
 C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGCTAACCG---
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AAGCTAACCG--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGCTAACCG---
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAGCTAACCG
AAGATAAGATAACA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C C G A T C G T A C T G A A T G C A G T C A C T G
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T