Information for 2-AGATGCCAGC (Motif 12)

C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
Reverse Opposite:
C T A G G A T C G A C T A C T G T A C G A G T C C T G A A G C T A G T C G C A T
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.662
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif7.53%
Number of Background Sequences with motif373.1
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets45.0 +/- 29.0bp
Average Position of motif in Background50.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGATGCCAGC-
--ATGCCAACC
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGATGCCAGC-----
ACTATGCCAACCTACC
 A C G T C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGATGCCAGC
CAAGATGGCGGC
 A C G T A C G T C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGATGCCAGC--
--ATGCCAGACN
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGATGCCAGC
-CGTGCCAAG
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGATGCCAGC
---TGCCAA-
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGATGCCAGC-
--ATGCCCACC
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGATGCCAGC
CAAGATGGCGGC
 A C G T A C G T C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGATGCCAGC
RCATTCCWGG
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGATGCCAGC
RCATTCCWGG
 C G T A T C A G T C G A G A C T T C A G A T G C T G A C C T G A C T A G G A T C
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G