Information for 3-AGGGTGCTGCTGTCCC (Motif 4)

C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G C T G A A G T C G C T A A T C G G T A C C G T A A C T G A G T C G T C A T G A C A G T C A G T C G A C T
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 21.4bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC
-AGATGCTRCTRCCHT
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGGGTGCTGCTGTCCC-
----TGCAGCTGTCCCT
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC
--NNAGCAGCTGCT--
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC-
--GGNGCGNCTGTTNNN
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC
---NNGCAGCTGTC--
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGTGCTGCTGTCCC
AAGGKGRCGCAGGCA-
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC-
-TNNTGCTACTGTNNNN
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC
---NNGCAGCTGTT--
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGGTGCTGCTGTCCC-
-CNNNGCTACTGTANNN
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGGTGCTGCTGTCCC
----ANCAGCTG----
 C T G A C T A G A C T G A C T G C A G T A C T G A G T C A C G T A C T G A T G C C G A T C T A G A G C T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T