Information for 10-CCCCTCAGCATCG (Motif 11)

A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A A C G T A C T G A G T C A C G T A C T G C G T A A C T G A T C G A C T G A C T G
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 13.8bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCCTCAGCATCG
--DCTCAGCAGG-
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCCTCAGCATCG--
CCACACAGCAGGAGA
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCAGCATCG
AGCCACTCAAG----
 A C G T A C G T A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CCCCTCAGCATCG
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCCTCAGCATCG--
CCACACAGCAGGAGA
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCCTCAGCATCG
TGAGTCAGCA---
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCCTCAGCATCG--
---CACAGCAGGGGG
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCCTCAGCATCG-
---GTCAGCANNTN
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTCAGCATCG
TTCCCCCTAC------
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCCTCAGCATCG-
--NGTCAGCANTTT
 A G T C A G T C A T G C A G T C A C G T A G T C C G T A A C T G A G T C G T C A A C G T A T G C A C T G A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T