Information for 17-TCGGTCGACC (Motif 30)

A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A T G C T A C G T G C A A G T C G A T C A C T G C G T A
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 13.6bp
Average Position of motif in Background51.1 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCGGTCGACC----
-CNNTTGACCTTTG
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGGTCGACC-------
NNANTTGACCCCTNNNN
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCGGTCGACC-
-----TGACCT
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCGGTCGACC
CGTGGGTGGTCC
 A C G T A C G T A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCGGTCGACC-----
---GGCGACCACCGA
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCGGTCGACC---
-----TGACCYCT
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCGGTCGACC-------
NNNNTTGACCCCTNNNN
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCGGTCGACC-
TTCGGTGGTCGC
 A C G T A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCGGTCGACC-------
-NNNNTGACCTTTNNNN
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCGGTCGACC------
----GCGACCACACTG
 A C G T A G T C C A T G A C T G A C G T A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G