Information for 3-CRTGCKMCYCGCYMGG (Motif 4)

A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G T C G A A C T G A G T C A C T G T C A G A C T G A C G T G T A C A C T G A G T C C G T A G A T C C T A G
p-value:1e-13
log p-value:-2.999e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 26.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CRTGCKMCYCGCYMGG---
--TACGCCCCGCCACTCTG
 A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CRTGCKMCYCGCYMGG--
NCGACCGCTCCGCTCGAAA
 A C G T A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CRTGCKMCYCGCYMGG
ACATGCTACCTAATAC-
 A C G T A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CRTGCKMCYCGCYMGG
-----TTCCCGCCWG-
 A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CRTGCKMCYCGCYMGG
---NNTTCCCGCCC--
 A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CRTGCKMCYCGCYMGG-
--GGCCYCCTGCTGDGH
 A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CRTGCKMCYCGCYMGG
ACTTGCTACCTACACC-
 A C G T A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CRTGCKMCYCGCYMGG
RTACGTGC-----------
 A C G T A C G T A C G T A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CRTGCKMCYCGCYMGG
CNGTCCTCCC-------
 A C G T A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CRTGCKMCYCGCYMGG
---NCTTCCCGCCC--
 A G T C C T A G C G A T A C T G A G T C A C T G T G C A A G T C A G T C A G T C A C T G A G T C A G C T G T A C A C T G A C T G
A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T