Information for 10-AMAAAAGGCCTTT (Motif 9)

G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C T G A G T C G T A C C G A T C G A T A G C T C A G T A C T G C A G T
p-value:1e-11
log p-value:-2.623e+01
Information Content per bp:1.834
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.8 +/- 27.3bp
Average Position of motif in Background59.5 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:AMAAAAGGCCTTT
-----AGGCCTNG
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AMAAAAGGCCTTT
-----AGGCCTAG
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AMAAAAGGCCTTT----
-----TGACCTTTNCNT
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT-------
-----TGGACTTTGNNCTCN
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT----
-NNNNTGACCTTTNNNN
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT--
AGGGAAGTCATTTCT
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT----
-NNNGTGACCTTTGNNN
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AMAAAAGGCCTTT
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT----
-NNATTGGACTTTNGNN
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AMAAAAGGCCTTT
AACAAAGG-----
 G T C A T G A C G C T A C T G A C G T A C G T A A C T G C T A G A G T C G T A C A C G T C G A T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T