Information for 16-TGACWGGCAGMAA (Motif 22)

C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
Reverse Opposite:
G C A T C G A T A C T G A G T C A C G T A T C G G A T C A G T C C G A T A C T G A C G T A T G C G C T A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.688
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif500.4
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets51.0 +/- 24.9bp
Average Position of motif in Background51.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGACWGGCAGMAA
NTGATTGACAGN--
 A C G T C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGACWGGCAGMAA
BTGABTGACAGS--
 A C G T C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACWGGCAGMAA
TGAGTGACAGSC-
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGACWGGCAGMAA
--TGAGTCAGCA-
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGACWGGCAGMAA
AGGTGNCAGACAG---
 A C G T A C G T A C G T C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGACWGGCAGMAA---
----NGTCAGCANTTT
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGACWGGCAGMAA
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGACWGGCAGMAA---
-----GTCAGCANNTN
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGACWGGCAGMAA-----
---AAGTCAGCANTTTTN
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGACWGGCAGMAA
--VBTGWCAGCB-
 C G A T A T C G T G C A T G A C G C T A A C T G C T A G A T G C C G T A A C T G G T A C C G T A C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T