Information for 14-CCGCAGTCTCCGC (Motif 18)

G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G C G T A A C T G C G T A A G T C A G C T A C T G G T A C A C T G A C T G
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 23.8bp
Average Position of motif in Background32.6 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGCAGTCTCCGC--
---CAACGTCCGCGG
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGCAGTCTCCGC
---AAATCACTGC
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCGCAGTCTCCGC
------GCTCCG-
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCGCAGTCTCCGC-----
------GCTCCGCCCMCY
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCGCAGTCTCCGC
---CTGTCTGG--
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCGCAGTCTCCGC-
CCCCCGCCCCCGCC
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCGCAGTCTCCGC
GCTCGGSCTC---
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCGCAGTCTCCGC-----
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCGCAGTCTCCGC-
--GCTGASTCAGCA
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T
A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCGCAGTCTCCGC---
-ACCACTCTCGGTCAC
 G T A C A G T C A C T G A G T C C T G A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C