Information for 4-AGATCAGKGATGCAAA (Motif 13)

C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A
Reverse Opposite:
A G C T A C G T A G C T T A C G G T A C T C G A C G A T A G T C G T A C T A G C C G A T A T C G G T C A C G A T A G T C C G A T
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.686
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif66.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets54.4 +/- 26.4bp
Average Position of motif in Background46.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:AGATCAGKGATGCAAA----
-------ATATGCAAATNNN
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGATCAGKGATGCAAA-
-------TTATGCAAAT
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA----
--------TATGCWAATBAV
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA
-----NATGTTGCAA-
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA-
-------ATATGCAAAT
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA
------CGGTTTCAAA
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.58
Offset:8
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA-
--------TATGCAAAT
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA----
--------WATGCAAATGAG
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AGATCAGKGATGCAAA--
--------AATGGAAAAT
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGATCAGKGATGCAAA-----
-----TTGTATGCAAATTAGA
 C G T A C T A G C G T A C A G T A T G C G C T A A T C G C A T G T C A G C G T A A C G T C A T G A T G C C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A