Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-184 | -4.247e+02 | 0.0000 | 448.0 | 50.45% | 5300.0 | 11.10% | motif file (matrix) |
svg |
2 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-180 | -4.156e+02 | 0.0000 | 490.0 | 55.18% | 6695.2 | 14.02% | motif file (matrix) |
svg |
3 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-28 | -6.534e+01 | 0.0000 | 227.0 | 25.56% | 5676.5 | 11.89% | motif file (matrix) |
svg |
4 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-11 | -2.546e+01 | 0.0000 | 301.0 | 33.90% | 11384.1 | 23.84% | motif file (matrix) |
svg |
5 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-7 | -1.831e+01 | 0.0000 | 14.0 | 1.58% | 101.0 | 0.21% | motif file (matrix) |
svg |
6 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-5 | -1.336e+01 | 0.0001 | 128.0 | 14.41% | 4528.3 | 9.48% | motif file (matrix) |
svg |
7 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-5 | -1.327e+01 | 0.0001 | 130.0 | 14.64% | 4625.0 | 9.68% | motif file (matrix) |
svg |
8 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.277e+01 | 0.0001 | 177.0 | 19.93% | 6829.9 | 14.30% | motif file (matrix) |
svg |
9 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-4 | -1.142e+01 | 0.0004 | 104.0 | 11.71% | 3640.2 | 7.62% | motif file (matrix) |
svg |
10 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-4 | -1.140e+01 | 0.0004 | 118.0 | 13.29% | 4264.8 | 8.93% | motif file (matrix) |
svg |
11 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.051e+01 | 0.0009 | 76.0 | 8.56% | 2504.9 | 5.24% | motif file (matrix) |
svg |
12 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.987e+00 | 0.0038 | 66.0 | 7.43% | 2198.6 | 4.60% | motif file (matrix) |
svg |
13 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.812e+00 | 0.0042 | 19.0 | 2.14% | 383.6 | 0.80% | motif file (matrix) |
svg |
14 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -8.634e+00 | 0.0046 | 95.0 | 10.70% | 3505.3 | 7.34% | motif file (matrix) |
svg |
15 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-3 | -8.632e+00 | 0.0046 | 103.0 | 11.60% | 3868.2 | 8.10% | motif file (matrix) |
svg |
16 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.971e+00 | 0.0079 | 42.0 | 4.73% | 1273.6 | 2.67% | motif file (matrix) |
svg |
17 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.669e+00 | 0.0100 | 91.0 | 10.25% | 3426.1 | 7.17% | motif file (matrix) |
svg |
18 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -7.240e+00 | 0.0145 | 83.0 | 9.35% | 3109.5 | 6.51% | motif file (matrix) |
svg |
19 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -6.996e+00 | 0.0175 | 352.0 | 39.64% | 16507.7 | 34.57% | motif file (matrix) |
svg |
20 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -6.947e+00 | 0.0175 | 25.0 | 2.82% | 666.8 | 1.40% | motif file (matrix) |
svg |
21 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.866e+00 | 0.0181 | 47.0 | 5.29% | 1559.0 | 3.26% | motif file (matrix) |
svg |
22 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -6.581e+00 | 0.0229 | 109.0 | 12.27% | 4394.3 | 9.20% | motif file (matrix) |
svg |
23 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.550e+00 | 0.0229 | 45.0 | 5.07% | 1498.6 | 3.14% | motif file (matrix) |
svg |
24 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.502e+00 | 0.0229 | 77.0 | 8.67% | 2917.0 | 6.11% | motif file (matrix) |
svg |
25 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.328e+00 | 0.0260 | 40.0 | 4.50% | 1304.8 | 2.73% | motif file (matrix) |
svg |
26 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.305e+00 | 0.0260 | 42.0 | 4.73% | 1390.8 | 2.91% | motif file (matrix) |
svg |
27 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.219e+00 | 0.0268 | 156.0 | 17.57% | 6714.2 | 14.06% | motif file (matrix) |
svg |
28 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.757e+00 | 0.0411 | 100.0 | 11.26% | 4082.4 | 8.55% | motif file (matrix) |
svg |
29 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.673e+00 | 0.0432 | 29.0 | 3.27% | 895.6 | 1.88% | motif file (matrix) |
svg |
30 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.623e+00 | 0.0439 | 11.0 | 1.24% | 223.0 | 0.47% | motif file (matrix) |
svg |
31 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.585e+00 | 0.0441 | 36.0 | 4.05% | 1193.0 | 2.50% | motif file (matrix) |
svg |
32 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.457e+00 | 0.0485 | 55.0 | 6.19% | 2034.3 | 4.26% | motif file (matrix) |
svg |
33 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.380e+00 | 0.0508 | 56.0 | 6.31% | 2087.4 | 4.37% | motif file (matrix) |
svg |
34 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.133e+00 | 0.0631 | 36.0 | 4.05% | 1228.6 | 2.57% | motif file (matrix) |
svg |
35 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.093e+00 | 0.0639 | 16.0 | 1.80% | 419.0 | 0.88% | motif file (matrix) |
svg |
36 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.056e+00 | 0.0644 | 227.0 | 25.56% | 10503.1 | 21.99% | motif file (matrix) |
svg |
37 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.054e+00 | 0.0644 | 47.0 | 5.29% | 1717.3 | 3.60% | motif file (matrix) |
svg |
38 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.980e+00 | 0.0658 | 33.0 | 3.72% | 1112.9 | 2.33% | motif file (matrix) |
svg |
39 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -4.965e+00 | 0.0658 | 5.0 | 0.56% | 63.5 | 0.13% | motif file (matrix) |
svg |
40 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -4.847e+00 | 0.0715 | 30.0 | 3.38% | 995.2 | 2.08% | motif file (matrix) |
svg |
41 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -4.652e+00 | 0.0847 | 21.0 | 2.36% | 636.4 | 1.33% | motif file (matrix) |
svg |