Information for 6-ATTAGTGCTG (Motif 9)

G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
Reverse Opposite:
A G T C G T C A A C T G A T G C C T G A A G T C C G A T G T C A G T C A A C G T
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.856
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif21.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.1 +/- 22.2bp
Average Position of motif in Background37.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGTGCTG
AATTAGTG---
 A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATTAGTGCTG
GTACTAATTAGTGGCG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PH0156.1_Rax/Jaspar

Match Rank:3
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGTGCTG
NNGCGCTAATTAGTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
C T A G A C G T A T C G T A G C C T A G A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G C T T A C G A T G C G C T A A C G T

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------ATTAGTGCTG
GAAGACCAATTAGCGCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGTGCTG--
NNAATTAGTCACGGT
 A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PH0033.1_Gbx1/Jaspar

Match Rank:6
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------ATTAGTGCTG
TGCCACTAATTAGTGTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A A C G T

PH0029.1_En2/Jaspar

Match Rank:7
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGTGCTG
NTNCACTAATTAGNGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
C G A T C A G T A G T C T A G C C T G A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T C A T G A G T C G C T A A C G T

PH0110.1_Nkx1-2/Jaspar

Match Rank:8
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------ATTAGTGCTG
GTGCACTAATTAGTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
C A T G C A G T A C T G T G A C T C G A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A C G T C T A G A T G C G C T A A C G T

PH0027.1_Emx2/Jaspar

Match Rank:9
Score:0.63
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGTGCTG
NNCCACTAATTAGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------ATTAGTGCTG
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T C G T A A C T G A G C T A T C G A G T C A C G T C T A G
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G