Information for 3-GTDCCAAGTCCVCGTG (Motif 3)

A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C T A G A C G T C T A G A T C G G T C A G T A C A C G T A C G T A C T G C T A G G T C A C G T A A G T C
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 14.3bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG--
--------KCCACGTGAC
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.62
Offset:8
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG
--------GCCACGTG
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:8
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG
--------NCCACGTG
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.61
Offset:8
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG-
--------GCCACGTGT
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:GTDCCAAGTCCVCGTG---
---------CCACGTGGNN
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:GTDCCAAGTCCVCGTG---
---------CCACGTGGNN
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.60
Offset:9
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG---
---------CCATGTGCTT
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.59
Offset:8
Orientation:forward strand
Alignment:GTDCCAAGTCCVCGTG
--------NVCACGTG
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GTDCCAAGTCCVCGTG---
--------ACCACGTGCTC
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTDCCAAGTCCVCGTG--
------NNACCACGTGGT
 A C T G C G A T C A G T A G T C G T A C G T C A G T C A A C T G A C G T A T G C A G T C T G C A A G T C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T