Information for 2-CGCAGAACYSCAGGGM (Motif 2)

A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C
Reverse Opposite:
A C T G A G T C G T A C G T A C A G C T A C T G T A C G C T A G A C T G A G C T A C G T A G T C A C G T A C T G A T G C C T A G
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.764
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.8 +/- 23.4bp
Average Position of motif in Background49.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CGCAGAACYSCAGGGM--
------GCCTCAGGGCAT
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CGCAGAACYSCAGGGM--
------TCCCCTGGGGAC
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGCAGAACYSCAGGGM----
---NNNANTGCAGTGCNNTT
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGCAGAACYSCAGGGM
NGNTCTAGAACCNGV----
 A C G T A C G T A C G T A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCAGAACYSCAGGGM--
------SCCTSAGGSCAW
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGCAGAACYSCAGGGM
CACAGN----------
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGAACYSCAGGGM
ATGCCAGACN--------
 A C G T A C G T A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CGCAGAACYSCAGGGM-
-----CACAGCAGGGGG
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CGCAGAACYSCAGGGM--
---ATTCCCTGAGGGGAA
 A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CGCAGAACYSCAGGGM
NNGATCTAGAACCTNNN---
 A C G T A C G T A C G T A C G T A G T C A T C G A G T C C G T A A C T G T G C A T C G A A G T C A G T C A T G C A G T C C T G A A C T G C A T G A C T G T G A C
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T A C G T A C G T