Information for 10-CACGCGTGACGTC (Motif 19)

A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C
Reverse Opposite:
A T C G T G C A T A G C T C A G G A C T A G T C G T C A A T G C C T A G A G T C A T C G A G C T T A C G
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.690
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif106.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.4 +/- 29.0bp
Average Position of motif in Background46.5 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CACGCGTGACGTC
-NCACGTGACN--
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:CACGCGTGACGTC----
-----GTGACGTCACCG
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CACGCGTGACGTC
-NCACGTGACN--
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:CACGCGTGACGTC-
------TGACGTCA
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACGCGTGACGTC
NNCGCGTGNN---
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CACGCGTGACGTC
------TGACGT-
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CACGCGTGACGTC----
-----RTGACGTCAYCN
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CACGCGTGACGTC----
-----ATGACGTCATCN
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CACGCGTGACGTC---
----GATGACGTCATC
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CACGCGTGACGTC----
-----ATGACGTCAYYN
 A T G C C T G A T A G C C T A G A G T C A T C G C A G T A C T G C T G A A G T C A C T G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G