Information for 8-GCCACCTACTGGK (Motif 16)

A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G
Reverse Opposite:
T G A C G T A C A G T C C G T A A C T G A G C T C T G A A C T G A C T G C G A T A C T G T A C G A T G C
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.810
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif149.7
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets47.9 +/- 22.1bp
Average Position of motif in Background51.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTACTGGK--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.81
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTACTGGK
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTACTGGK--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTACTGGK-
GGCCYCCTGCTGDGH
 A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCCACCTACTGGK
-CCCCCTGCTGTG
 A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTACTGGK
SNGCACCTGCHS--
 A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCACCTACTGGK---
-TCNCCTGCTGNGNNN
 A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCACCTACTGGK---
-TNTCCTGCTGTGNNG
 A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTACTGGK-
GACCCCCCGCTGTGC
 A C G T A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCCACCTACTGGK-
----CCTGCTGAGH
 A T C G A G T C A G T C C G T A A G T C A G T C A G C T T C G A T A G C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A