Information for 24-GGCCAGKGGKAAG (Motif 36)

C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T G T C A A G T C A G T C G T C A A G T C C G A T A T C G C T A G A G T C A G T C
p-value:1e-4
log p-value:-1.092e+01
Information Content per bp:1.827
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif69.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.9 +/- 23.7bp
Average Position of motif in Background53.3 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCAGKGGKAAG
TGTCAGGGGGCG-
 C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCAGKGGKAAG
AGCCAATCGG---
 C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGKGGKAAG
TAGGGCAAAGGTCA-
 A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGKGGKAAG
NTGCCCANNGGTNA-
 A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGKGGKAAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGKGGKAAG
ATTGCCTGAGGCAAT
 A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCCAGKGGKAAG----
-NNNNGGGGGAAGANGG
 C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGKGGKAAG
ACTAGCCAATCA----
 A C G T A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGKGGKAAG
GAGGTCAAAGGTCA-
 A C G T A C G T C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCCAGKGGKAAG
-SCCTSAGGSCAW
 C T A G A C T G A G T C A T G C C G T A C T A G A C G T A C T G C T A G A C G T G T C A C G T A A C T G
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T