Information for 13-GGAAGTACTT (Motif 28)

A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
Reverse Opposite:
C T G A G T C A C A T G A C G T G T C A G T A C C G A T A G C T T G A C T A G C
p-value:1e-6
log p-value:-1.503e+01
Information Content per bp:1.732
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif205.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets46.8 +/- 23.4bp
Average Position of motif in Background48.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGAAGTACTT-----
TACTAAGTACTTAAATG
 A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GGAAGTACTT----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGAAGTACTT----
CNTTAAGTACTTAANG
 A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGAAGTACTT-----
TTTTAAGTACTTAAATT
 A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAAGTACTT
TTAAGTGCTT
 A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGAAGTACTT
AGCGGAAGTG---
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GGAAGTACTT
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGAAGTACTT
ACCCGGAAGTA---
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T

EHF/MA0598.2/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGAAGTACTT
AACCCGGAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGAAGTACTT
ACVAGGAAGT----
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A A C T G A C G T G T C A G T A C A C G T A G C T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T