Information for 16-TGGRAACKTCCTY (Motif 21)

A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
Reverse Opposite:
C T G A G T C A A C T G T A C G G T C A G T C A T A C G A G C T A C G T A G T C A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.742
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.9 +/- 26.4bp
Average Position of motif in Background50.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGRAACKTCCTY
CSTGGGAAAD-----
 A C G T A C G T A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGRAACKTCCTY
-GGGAATTTCC--
 A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGRAACKTCCTY
AATGGAAAAT-----
 A C G T A C G T A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGRAACKTCCTY
NATGGAAAAN-----
 A C G T A C G T A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGRAACKTCCTY
NNTGGAAANN-----
 A C G T A C G T A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGRAACKTCCTY
AATGGAAAAT-----
 A C G T A C G T A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGRAACKTCCTY
TGGAAAA------
 A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGRAACKTCCTY
-GGGAAATCCCCN
 A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGRAACKTCCTY
-GGGAATTTCC--
 A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGRAACKTCCTY
-GGAAATCCCC--
 A C G T C T A G A C T G C T A G C G T A C T G A A T G C C A G T A C G T A T G C G T A C A C G T A G C T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T