Information for 13-CCCCTGCTGATCC (Motif 15)

A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
Reverse Opposite:
A T C G A T C G C T G A A C G T A G T C C G T A C T A G A G T C C G T A A C T G A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.8 +/- 16.6bp
Average Position of motif in Background46.8 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGCTGATCC
CCCCCTGCTGTG--
 A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGATCC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCCCTGCTGATCC
--CCTGCTGAGH-
 A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGATCC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGATCC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGATCC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCCCTGCTGATCC-
----TGCTGACTCA
 A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGCTGATCC-
TCNCCTGCTGNGNNN
 A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGCTGATCC
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGCTGATCC
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A G C T A T G C A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T