Information for 7-TWGYTCWRWCACT (Motif 7)

A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G A T A G C T C G A T A C T G C G T A C T A G A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.821
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.4 +/- 21.6bp
Average Position of motif in Background64.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TWGYTCWRWCACT--------
-----CAATCACTGGCAGAAT
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TWGYTCWRWCACT---
------MRSCACTYAA
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TWGYTCWRWCACT--
GAAGATCAATCACTAA
 A C G T A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TWGYTCWRWCACT--
GAAGATCAATCACTTA
 A C G T A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TWGYTCWRWCACT---
------AAGCACTTAA
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TWGYTCWRWCACT---
------AASCACTCAA
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TWGYTCWRWCACT----
-------RSCACTYRAG
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TWGYTCWRWCACT-
--TGTCTGDCACCT
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TWGYTCWRWCACT----
--------CCACTTGAA
 A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

MAF::NFE2/MA0501.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TWGYTCWRWCACT
AAANTGCTGAGTCAT-
 A C G T A C G T A C G T A C G T C G A T C T A G G A T C C G A T A G T C C G T A T C G A C G T A A G T C C G T A A G T C A C G T
C T G A C G T A G C T A G A C T G A C T T A C G G T A C G C A T C A T G G C T A T A C G A C G T G T A C C G T A A G C T A C G T