Information for 1-TGACCYYDNG (Motif 1)

A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
Reverse Opposite:
G A T C T G C A G A T C T C G A C T A G A C T G A C T G A C G T A G T C C G T A
p-value:1e-150
log p-value:-3.475e+02
Information Content per bp:1.715
Number of Target Sequences with motif384.0
Percentage of Target Sequences with motif45.55%
Number of Background Sequences with motif4925.8
Percentage of Background Sequences with motif10.23%
Average Position of motif in Targets52.6 +/- 23.8bp
Average Position of motif in Background50.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGACCYYDNG
TGACCYCT--
 A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGACCYYDNG
TGACCT----
 A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGACCYYDNG
TGACCTYA--
 A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----TGACCYYDNG
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.91
Offset:-5
Orientation:forward strand
Alignment:-----TGACCYYDNG--
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----TGACCYYDNG--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGACCYYDNG
TGACCTTGAT
 A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-TGACCYYDNG
GTGACCTT---
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-TGACCYYDNG
NTGACCTTGA-
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.88
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCYYDNG--
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A G C T C T A G A C G T C T A G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G