Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-61 | -1.410e+02 | 0.0000 | 76.0 | 8.44% | 268.8 | 0.56% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-44 | -1.034e+02 | 0.0000 | 80.0 | 8.89% | 523.0 | 1.09% | motif file (matrix) |
svg |
3 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-16 | -3.693e+01 | 0.0000 | 133.0 | 14.78% | 3268.0 | 6.84% | motif file (matrix) |
svg |
4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-14 | -3.276e+01 | 0.0000 | 128.0 | 14.22% | 3265.0 | 6.83% | motif file (matrix) |
svg |
5 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.647e+01 | 0.0000 | 73.0 | 8.11% | 1561.4 | 3.27% | motif file (matrix) |
svg |
6 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-11 | -2.577e+01 | 0.0000 | 107.0 | 11.89% | 2803.5 | 5.86% | motif file (matrix) |
svg |
7 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-11 | -2.573e+01 | 0.0000 | 60.0 | 6.67% | 1163.4 | 2.43% | motif file (matrix) |
svg |
8 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-10 | -2.510e+01 | 0.0000 | 74.0 | 8.22% | 1643.8 | 3.44% | motif file (matrix) |
svg |
9 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-9 | -2.300e+01 | 0.0000 | 135.0 | 15.00% | 4055.2 | 8.48% | motif file (matrix) |
svg |
10 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-9 | -2.196e+01 | 0.0000 | 41.0 | 4.56% | 690.3 | 1.44% | motif file (matrix) |
svg |
11 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-9 | -2.145e+01 | 0.0000 | 136.0 | 15.11% | 4195.4 | 8.78% | motif file (matrix) |
svg |
12 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-8 | -2.058e+01 | 0.0000 | 70.0 | 7.78% | 1679.5 | 3.51% | motif file (matrix) |
svg |
13 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-8 | -2.010e+01 | 0.0000 | 34.0 | 3.78% | 535.5 | 1.12% | motif file (matrix) |
svg |
14 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-8 | -1.918e+01 | 0.0000 | 63.0 | 7.00% | 1489.9 | 3.12% | motif file (matrix) |
svg |
15 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-8 | -1.895e+01 | 0.0000 | 72.0 | 8.00% | 1822.0 | 3.81% | motif file (matrix) |
svg |
16 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.798e+01 | 0.0000 | 26.0 | 2.89% | 364.3 | 0.76% | motif file (matrix) |
svg |
17 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-7 | -1.792e+01 | 0.0000 | 53.0 | 5.89% | 1191.9 | 2.49% | motif file (matrix) |
svg |
18 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-7 | -1.768e+01 | 0.0000 | 9.0 | 1.00% | 33.6 | 0.07% | motif file (matrix) |
svg |
19 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.653e+01 | 0.0000 | 88.0 | 9.78% | 2559.7 | 5.35% | motif file (matrix) |
svg |
20 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-7 | -1.622e+01 | 0.0000 | 124.0 | 13.78% | 4062.2 | 8.50% | motif file (matrix) |
svg |
21 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 22.0 | 2.44% | 307.2 | 0.64% | motif file (matrix) |
svg |
22 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-6 | -1.522e+01 | 0.0000 | 17.0 | 1.89% | 191.6 | 0.40% | motif file (matrix) |
svg |
23 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 15.0 | 1.67% | 158.2 | 0.33% | motif file (matrix) |
svg |
24 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-6 | -1.411e+01 | 0.0000 | 233.0 | 25.89% | 9212.6 | 19.27% | motif file (matrix) |
svg |
25 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.359e+01 | 0.0000 | 156.0 | 17.33% | 5695.3 | 11.91% | motif file (matrix) |
svg |
26 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 61.0 | 6.78% | 1697.6 | 3.55% | motif file (matrix) |
svg |
27 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.257e+01 | 0.0000 | 56.0 | 6.22% | 1537.6 | 3.22% | motif file (matrix) |
svg |
28 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.216e+01 | 0.0001 | 61.0 | 6.78% | 1753.7 | 3.67% | motif file (matrix) |
svg |
29 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-5 | -1.210e+01 | 0.0001 | 69.0 | 7.67% | 2074.7 | 4.34% | motif file (matrix) |
svg |
30 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-4 | -1.040e+01 | 0.0004 | 76.0 | 8.44% | 2481.0 | 5.19% | motif file (matrix) |
svg |
31 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-4 | -9.939e+00 | 0.0006 | 99.0 | 11.00% | 3510.4 | 7.34% | motif file (matrix) |
svg |
32 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -9.130e+00 | 0.0012 | 108.0 | 12.00% | 3991.1 | 8.35% | motif file (matrix) |
svg |
33 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -8.687e+00 | 0.0019 | 44.0 | 4.89% | 1293.0 | 2.70% | motif file (matrix) |
svg |
34 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-3 | -8.462e+00 | 0.0023 | 243.0 | 27.00% | 10501.6 | 21.97% | motif file (matrix) |
svg |
35 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -8.431e+00 | 0.0023 | 108.0 | 12.00% | 4067.0 | 8.51% | motif file (matrix) |
svg |
36 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.230e+00 | 0.0027 | 65.0 | 7.22% | 2189.4 | 4.58% | motif file (matrix) |
svg |
37 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -8.215e+00 | 0.0027 | 22.0 | 2.44% | 497.9 | 1.04% | motif file (matrix) |
svg |
38 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-3 | -8.184e+00 | 0.0027 | 9.0 | 1.00% | 110.0 | 0.23% | motif file (matrix) |
svg |
39 |
| p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-3 | -8.033e+00 | 0.0030 | 11.0 | 1.22% | 162.6 | 0.34% | motif file (matrix) |
svg |
40 |
| p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-3 | -8.033e+00 | 0.0030 | 11.0 | 1.22% | 162.6 | 0.34% | motif file (matrix) |
svg |
41 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.869e+00 | 0.0034 | 340.0 | 37.78% | 15493.6 | 32.41% | motif file (matrix) |
svg |
42 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -7.748e+00 | 0.0037 | 85.0 | 9.44% | 3106.2 | 6.50% | motif file (matrix) |
svg |
43 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -7.103e+00 | 0.0070 | 46.0 | 5.11% | 1479.1 | 3.09% | motif file (matrix) |
svg |
44 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.066e+00 | 0.0071 | 80.0 | 8.89% | 2954.3 | 6.18% | motif file (matrix) |
svg |
45 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -6.771e+00 | 0.0093 | 115.0 | 12.78% | 4593.1 | 9.61% | motif file (matrix) |
svg |
46 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -6.699e+00 | 0.0097 | 12.0 | 1.33% | 221.6 | 0.46% | motif file (matrix) |
svg |
47 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.458e+00 | 0.0121 | 28.0 | 3.11% | 797.5 | 1.67% | motif file (matrix) |
svg |
48 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.233e+00 | 0.0149 | 38.0 | 4.22% | 1212.8 | 2.54% | motif file (matrix) |
svg |
49 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.885e+00 | 0.0207 | 86.0 | 9.56% | 3363.6 | 7.04% | motif file (matrix) |
svg |
50 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.815e+00 | 0.0217 | 21.0 | 2.33% | 564.3 | 1.18% | motif file (matrix) |
svg |
51 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.766e+00 | 0.0224 | 30.0 | 3.33% | 918.8 | 1.92% | motif file (matrix) |
svg |
52 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.761e+00 | 0.0224 | 96.0 | 10.67% | 3843.9 | 8.04% | motif file (matrix) |
svg |
53 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.445e+00 | 0.0297 | 35.0 | 3.89% | 1146.3 | 2.40% | motif file (matrix) |
svg |
54 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.152e+00 | 0.0390 | 11.0 | 1.22% | 235.7 | 0.49% | motif file (matrix) |
svg |
55 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.122e+00 | 0.0395 | 215.0 | 23.89% | 9752.3 | 20.40% | motif file (matrix) |
svg |
56 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.088e+00 | 0.0401 | 8.0 | 0.89% | 142.9 | 0.30% | motif file (matrix) |
svg |
57 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.087e+00 | 0.0401 | 86.0 | 9.56% | 3469.7 | 7.26% | motif file (matrix) |
svg |
58 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.073e+00 | 0.0401 | 99.0 | 11.00% | 4083.7 | 8.54% | motif file (matrix) |
svg |
59 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.032e+00 | 0.0402 | 11.0 | 1.22% | 239.1 | 0.50% | motif file (matrix) |
svg |
60 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -4.728e+00 | 0.0537 | 14.0 | 1.56% | 356.7 | 0.75% | motif file (matrix) |
svg |
61 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.612e+00 | 0.0593 | 43.0 | 4.78% | 1563.9 | 3.27% | motif file (matrix) |
svg |