Information for 16-CSCSAGCYTCGSC (Motif 31)

A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A C T G C G T A C T A G A C T G A G T C A C G T A T G C A C T G A T G C C T A G
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets26.7 +/- 24.1bp
Average Position of motif in Background62.5 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CSCSAGCYTCGSC
---CAGCC-----
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CSCSAGCYTCGSC
-----GCTTCC--
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CSCSAGCYTCGSC
--CAAGCTT----
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CSCSAGCYTCGSC------
--TAAGCCACGCCCCCTTT
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CSCSAGCYTCGSC----
--NNGGCCACGCCTTTN
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CSCSAGCYTCGSC---
----GGCCCCGCCCCC
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CSCSAGCYTCGSC
GGCACGTGCC-----
 A C G T A C G T A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CSCSAGCYTCGSC
AGCAACAGCCGCACC
 A C G T A C G T A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CSCSAGCYTCGSC----
-----GCTCCGCCCMCY
 A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CSCSAGCYTCGSC
GAGSCCGAGC------
 A C G T A C G T A C G T A G T C A T C G A G T C A T C G C G T A C T A G A G T C G A T C A C G T A G T C A C T G A T C G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T