Information for 12-CTGCAGGCTA (Motif 27)

G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
Reverse Opposite:
C G A T G T C A T C A G T G A C A T G C C A G T A C T G G T A C T C G A C T A G
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.681
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif8.78%
Number of Background Sequences with motif2052.9
Percentage of Background Sequences with motif4.29%
Average Position of motif in Targets50.9 +/- 27.0bp
Average Position of motif in Background49.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGCTA
DCTCAGCAGG---
 A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGCTA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGCTA
CACAGCAGGGGG
 A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGCTA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGCTA--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAGGCTA
ACTTCCGGNT-
 A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAGGCTA
ACTTCCGGTT-
 A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CTGCAGGCTA
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTGCAGGCTA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGCTA-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T G A T C A G C T C A T G G T A C G T C A T A C G A C T G A G T C C A G T G C T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T