Information for 7-GAGCCRCAGAGGCCMS (Motif 26)

A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
Reverse Opposite:
A T C G A C G T T A C G A T C G A T G C G T A C C G A T A T G C A C G T A T C G G A C T C T A G C A T G A G T C C A G T A T G C
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.631
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif135.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets48.0 +/- 26.0bp
Average Position of motif in Background50.5 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAGCCRCAGAGGCCMS
------CAAAGGTCAG
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAGCCRCAGAGGCCMS
------CACAGN----
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GAGCCRCAGAGGCCMS------
--------CAGGCCNNGGCCNN
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCRCAGAGGCCMS
AGGTGNCAGACAG-----
 A C G T A C G T A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.46
Offset:8
Orientation:forward strand
Alignment:GAGCCRCAGAGGCCMS
--------CAGCC---
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GAGCCRCAGAGGCCMS
GAGSCCGAGC------
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GAGCCRCAGAGGCCMS
NNNACCGAGAGTNNN-
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GAGCCRCAGAGGCCMS
AGAGTCCAAAGTCCA-
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GAGCCRCAGAGGCCMS
GTAGGGCAAAGGTCA-
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.45
Offset:5
Orientation:reverse strand
Alignment:GAGCCRCAGAGGCCMS-
-----ACAAAGGNBCCT
 A T C G G T C A C T A G G T A C G A T C C T G A T A G C G T C A T A C G C G T A A C T G T A C G A T G C A T G C T G C A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T