Information for 9-GTCAGTGCGT (Motif 21)

A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T
Reverse Opposite:
C G T A A G T C C T A G A G T C G T C A A T G C A C G T A T C G C T G A G T A C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.847
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.8 +/- 19.6bp
Average Position of motif in Background61.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTCAGTGCGT--
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGCGT
TTAAGTGCTT
 A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTCAGTGCGT-
-----TGCGTG
 A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGTGCGT-
RGTTAGTGCCCY
 A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGTGCGT-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCAGTGCGT----
----TTGCGTGCVA
 A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCAGTGCGT------
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGTGCGT--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTCAGTGCGT--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGCGT
TTAAGTGC--
 A C T G A G C T A T G C G T C A A T C G A C G T A C T G A G T C A C T G G A C T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T