Information for 4-TCCTGCTCCGAVCCAG (Motif 19)

A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G A T C G A G T C A G C T T A G C A C T G A T C G T G C A C T A G A T G C T C G A A C T G A C T G T C G A
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.5 +/- 24.2bp
Average Position of motif in Background39.9 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTCCGAVCCAG
CCCCCTGCTGTG------
 A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTCCGAVCCAG
TNTCCTGCTGTGNNG---
 A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCCTGCTCCGAVCCAG
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGCTCCGAVCCAG
ACTTCCTGTT---------
 A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCCTGCTCCGAVCCAG
ACATCCTGNT---------
 A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCCTGCTCCGAVCCAG
NNAYTTCCTGHN---------
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTCCGAVCCAG
TCNCCTGCTGNGNNN---
 A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCCTGCTCCGAVCCAG
CACTTCCTGT----------
 A C G T A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGCTCCGAVCCAG
ATTTCCTGTN---------
 A C G T A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTCCGAVCCAG
NNTCCTGCTGTGNNN---
 A C G T A C G T A G C T G T A C A G T C A G C T A T C G A G T C A C G T A T G C G T A C A T C G C T G A T A C G T A G C A G T C C G T A A T C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T