Information for 13-WCCTTTGCCCYTC (Motif 18)

G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
Reverse Opposite:
C T A G G T C A C T A G A C T G A C T G A C T G A T G C G T C A T G C A C T G A A C T G A T C G C G A T
p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.750
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.4 +/- 21.2bp
Average Position of motif in Background56.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGCCCTA-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGCCCTAN
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGCCCCA-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGACCTN-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGACCTC-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTCTGACCCCN
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGACCCC-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGACCCC-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTGCCCYTC
TGACCTTTGACCCC-
 A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----WCCTTTGCCCYTC
GTTGACCTTTGACCTTT
 A C G T A C G T A C G T A C G T G C T A A T G C A G T C A G C T A C G T C A G T T A C G A G T C G T A C G T A C A G T C C A G T A G T C
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T