Information for 10-RGGCTTAAGTGGC (Motif 15)

C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
Reverse Opposite:
T A C G A T G C G T A C G C T A A T G C G A C T C A G T G T C A C G T A C T A G A T G C A T G C A G C T
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.685
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 14.3bp
Average Position of motif in Background32.0 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC----
NTNNTTAAGTGGNTNAN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC
----TTAAGTGGT
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC
----TTAAGTGGN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:RGGCTTAAGTGGC
---BTBRAGTGSN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC
---CTYRAGTGSY
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC
---NTCAAGTGGN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC---
AATNTTAAGTGGNTNN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC-
----TTGAGTGSTT
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC----
NTNNTTAAGTGGTTANN
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RGGCTTAAGTGGC
---NTCAAGTGG-
 C T G A T A C G A T C G G A T C G A C T A C G T G T C A C T G A T A C G C G A T A C T G T A C G A T G C
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T