Information for 9-CAAGTTGCAAAGA (Motif 14)

A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A T C G
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 28.0bp
Average Position of motif in Background44.9 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAGTTGCAAAGA---
-CAATTGCAAAAATAT
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGTTGCAAAGA
NATGTTGCAA---
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGTTGCAAAGA
-CTGTTGCTAGGS
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAGTTGCAAAGA--
NNCGTTGCTATGGNN
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTTGCAAAGA------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAGTTGCAAAGA--
NCCGTTGCTANGNGN
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAGTTGCAAAGA
-CGGTTTCAAA--
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAGTTGCAAAGA----
--KGTTGCTAGGMAACA
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAAGTTGCAAAGA----
---GTTGCCATGGNAAC
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAAGTTGCAAAGA
---GGTGCCAAGT
 A T G C C G T A G T C A A C T G A C G T A C G T A C T G A G T C G T C A C G T A C G T A A C T G C T G A
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T