Information for 7-GAAGGAGTTAAGC (Motif 10)

A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
Reverse Opposite:
A T C G G T A C A C G T A G C T C G T A C G T A A G T C A G C T A T G C A G T C A C G T A C G T G T A C
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 21.9bp
Average Position of motif in Background53.8 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAGGAGTTAAGC
-AAGGTGTKAA--
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAGGAGTTAAGC
-TAGGTGTGAAG-
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGAGTTAAGC
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAAGGAGTTAAGC
--AGGTGTTAAT-
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGGAGTTAAGC
-AAGGTGTGAA--
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAAGGAGTTAAGC-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAGGAGTTAAGC
-AAGGTGTGAAA-
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAGTTAAGC---
ACAAGCAATTAATGAAT
 A C G T A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAGTTAAGC---
ACAAGCAATTAATGAAT
 A C G T A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAGGAGTTAAGC
--NNGAGATAAGA
 A C T G C G T A C G T A A C T G A T C G C T G A A C T G A C G T C G A T C T G A C G T A A C T G A T G C
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A