Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 882)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47188)	% of Background Sequences with Motif
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-124	-2.857e+02	0.0000	294.0	33.33%	3062.5	6.49%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-114	-2.630e+02	0.0000	264.0	29.93%	2629.0	5.57%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-110	-2.553e+02	0.0000	245.0	27.78%	2290.3	4.85%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-106	-2.445e+02	0.0000	290.0	32.88%	3507.8	7.43%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-104	-2.411e+02	0.0000	198.0	22.45%	1479.8	3.13%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-104	-2.396e+02	0.0000	311.0	35.26%	4151.5	8.79%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-102	-2.357e+02	0.0000	97.0	11.00%	190.6	0.40%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-99	-2.294e+02	0.0000	202.0	22.90%	1659.1	3.51%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-92	-2.126e+02	0.0000	224.0	25.40%	2308.9	4.89%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-78	-1.810e+02	0.0000	177.0	20.07%	1637.7	3.47%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-75	-1.747e+02	0.0000	236.0	26.76%	3147.4	6.67%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-72	-1.677e+02	0.0000	172.0	19.50%	1678.6	3.55%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-70	-1.631e+02	0.0000	111.0	12.59%	604.2	1.28%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-63	-1.464e+02	0.0000	93.0	10.54%	449.1	0.95%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-51	-1.187e+02	0.0000	146.0	16.55%	1713.2	3.63%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-45	-1.051e+02	0.0000	167.0	18.93%	2493.0	5.28%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-40	-9.310e+01	0.0000	96.0	10.88%	919.5	1.95%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-39	-9.162e+01	0.0000	120.0	13.61%	1486.6	3.15%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-38	-8.855e+01	0.0000	126.0	14.29%	1688.8	3.58%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-30	-7.005e+01	0.0000	86.0	9.75%	993.9	2.10%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-21	-5.012e+01	0.0000	74.0	8.39%	1018.9	2.16%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-20	-4.829e+01	0.0000	53.0	6.01%	546.0	1.16%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-20	-4.651e+01	0.0000	65.0	7.37%	852.7	1.81%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-19	-4.556e+01	0.0000	71.0	8.05%	1024.0	2.17%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-18	-4.255e+01	0.0000	76.0	8.62%	1224.6	2.59%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-18	-4.204e+01	0.0000	75.0	8.50%	1207.9	2.56%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-17	-4.126e+01	0.0000	42.0	4.76%	400.8	0.85%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-17	-3.928e+01	0.0000	79.0	8.96%	1389.2	2.94%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-11	-2.536e+01	0.0000	106.0	12.02%	2809.6	5.95%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-9	-2.212e+01	0.0000	29.0	3.29%	370.6	0.78%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-9	-2.081e+01	0.0000	19.0	2.15%	167.8	0.36%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-8	-2.055e+01	0.0000	56.0	6.35%	1208.2	2.56%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-8	-2.021e+01	0.0000	56.0	6.35%	1220.4	2.58%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-8	-1.903e+01	0.0000	111.0	12.59%	3356.6	7.11%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-7	-1.833e+01	0.0000	56.0	6.35%	1289.4	2.73%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-7	-1.777e+01	0.0000	66.0	7.48%	1670.7	3.54%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-7	-1.754e+01	0.0000	86.0	9.75%	2443.1	5.17%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-7	-1.748e+01	0.0000	102.0	11.56%	3087.8	6.54%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-7	-1.693e+01	0.0000	28.0	3.17%	442.1	0.94%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-7	-1.620e+01	0.0000	39.0	4.42%	793.8	1.68%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-6	-1.582e+01	0.0000	31.0	3.51%	555.5	1.18%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-6	-1.495e+01	0.0000	49.0	5.56%	1178.0	2.49%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-6	-1.447e+01	0.0000	59.0	6.69%	1566.7	3.32%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-6	-1.431e+01	0.0000	57.0	6.46%	1499.5	3.18%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-6	-1.414e+01	0.0000	175.0	19.84%	6559.4	13.89%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-6	-1.406e+01	0.0000	49.0	5.56%	1216.7	2.58%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-5	-1.356e+01	0.0000	78.0	8.84%	2362.3	5.00%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-5	-1.313e+01	0.0000	39.0	4.42%	900.5	1.91%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-5	-1.283e+01	0.0000	117.0	13.27%	4070.3	8.62%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-5	-1.270e+01	0.0000	43.0	4.88%	1059.4	2.24%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-5	-1.241e+01	0.0000	33.0	3.74%	722.9	1.53%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-5	-1.213e+01	0.0000	300.0	34.01%	12851.8	27.22%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-4	-1.147e+01	0.0001	83.0	9.41%	2715.7	5.75%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-4	-1.144e+01	0.0001	15.0	1.70%	204.8	0.43%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-4	-1.144e+01	0.0001	44.0	4.99%	1153.3	2.44%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-4	-1.122e+01	0.0001	25.0	2.83%	499.1	1.06%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-4	-1.095e+01	0.0001	66.0	7.48%	2045.8	4.33%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-4	-1.095e+01	0.0001	9.0	1.02%	76.9	0.16%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-4	-1.087e+01	0.0001	13.0	1.47%	164.8	0.35%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-4	-1.079e+01	0.0001	196.0	22.22%	7940.5	16.82%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-4	-1.063e+01	0.0001	13.0	1.47%	168.0	0.36%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-4	-1.062e+01	0.0001	250.0	28.34%	10592.9	22.43%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-4	-1.039e+01	0.0002	56.0	6.35%	1676.9	3.55%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-4	-1.028e+01	0.0002	61.0	6.92%	1886.9	4.00%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-4	-1.010e+01	0.0002	65.0	7.37%	2064.0	4.37%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-4	-1.003e+01	0.0002	20.0	2.27%	378.0	0.80%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-4	-9.886e+00	0.0003	48.0	5.44%	1389.4	2.94%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-4	-9.737e+00	0.0003	76.0	8.62%	2554.6	5.41%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-4	-9.701e+00	0.0003	62.0	7.03%	1967.8	4.17%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-3	-8.953e+00	0.0007	20.0	2.27%	409.6	0.87%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-3	-8.690e+00	0.0009	11.0	1.25%	151.8	0.32%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-3	-8.582e+00	0.0009	9.0	1.02%	104.1	0.22%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-3	-8.547e+00	0.0010	17.0	1.93%	326.9	0.69%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-3	-8.505e+00	0.0010	70.0	7.94%	2399.1	5.08%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-3	-8.391e+00	0.0011	103.0	11.68%	3877.8	8.21%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-3	-8.217e+00	0.0013	125.0	14.17%	4912.8	10.40%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-3	-8.073e+00	0.0015	40.0	4.54%	1181.2	2.50%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-3	-7.651e+00	0.0022	104.0	11.79%	4008.0	8.49%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-7.606e+00	0.0023	19.0	2.15%	421.8	0.89%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-3	-7.285e+00	0.0031	40.0	4.54%	1231.6	2.61%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-3	-7.025e+00	0.0040	104.0	11.79%	4083.3	8.65%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-3	-7.008e+00	0.0040	25.0	2.83%	660.7	1.40%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-3	-6.934e+00	0.0043	11.0	1.25%	187.0	0.40%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-2	-6.870e+00	0.0045	5.0	0.57%	40.5	0.09%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-2	-6.771e+00	0.0049	64.0	7.26%	2294.4	4.86%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-6.743e+00	0.0050	7.0	0.79%	84.4	0.18%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-2	-6.681e+00	0.0053	111.0	12.59%	4455.0	9.43%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-2	-6.466e+00	0.0064	20.0	2.27%	501.1	1.06%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-2	-6.275e+00	0.0077	69.0	7.82%	2567.0	5.44%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2	-5.654e+00	0.0142	99.0	11.22%	4031.6	8.54%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-2	-5.559e+00	0.0154	33.0	3.74%	1063.7	2.25%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-2	-5.487e+00	0.0164	35.0	3.97%	1152.6	2.44%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2	-5.388e+00	0.0179	25.0	2.83%	748.3	1.58%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-5.187e+00	0.0216	34.0	3.85%	1133.0	2.40%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-2	-5.093e+00	0.0235	8.0	0.91%	143.4	0.30%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-2	-4.926e+00	0.0275	12.0	1.36%	279.3	0.59%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-2	-4.787e+00	0.0313	6.0	0.68%	93.0	0.20%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-2	-4.701e+00	0.0338	53.0	6.01%	2016.8	4.27%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-4.524e+00	0.0399	34.0	3.85%	1188.5	2.52%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-4.505e+00	0.0402	14.0	1.59%	369.5	0.78%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-1	-4.410e+00	0.0438	76.0	8.62%	3122.9	6.61%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-4.398e+00	0.0439	162.0	18.37%	7328.4	15.52%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-1	-4.368e+00	0.0448	51.0	5.78%	1963.9	4.16%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-1	-4.159e+00	0.0547	39.0	4.42%	1443.7	3.06%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-4.108e+00	0.0570	25.0	2.83%	836.9	1.77%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-1	-3.878e+00	0.0711	7.0	0.79%	145.6	0.31%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-1	-3.867e+00	0.0712	46.0	5.22%	1794.0	3.80%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-3.820e+00	0.0739	34.0	3.85%	1254.9	2.66%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-3.781e+00	0.0761	7.0	0.79%	148.7	0.32%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-1	-3.758e+00	0.0772	153.0	17.35%	7021.5	14.87%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.581e+00	0.0914	21.0	2.38%	707.5	1.50%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-1	-3.519e+00	0.0963	18.0	2.04%	585.6	1.24%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-3.506e+00	0.0967	37.0	4.20%	1423.5	3.01%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-3.448e+00	0.1016	13.0	1.47%	385.1	0.82%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-1	-3.424e+00	0.1031	19.0	2.15%	634.7	1.34%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1	-3.395e+00	0.1052	87.0	9.86%	3821.0	8.09%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-3.392e+00	0.1052	93.0	10.54%	4115.5	8.72%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-1	-3.365e+00	0.1066	64.0	7.26%	2710.9	5.74%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e-1	-3.306e+00	0.1121	2.0	0.23%	16.8	0.04%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-3.303e+00	0.1121	62.0	7.03%	2624.7	5.56%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-3.291e+00	0.1121	108.0	12.24%	4877.9	10.33%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e-1	-3.244e+00	0.1163	13.0	1.47%	397.4	0.84%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-3.202e+00	0.1203	7.0	0.79%	168.7	0.36%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-3.151e+00	0.1257	5.0	0.57%	101.3	0.21%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-3.118e+00	0.1288	79.0	8.96%	3481.6	7.37%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-1	-3.097e+00	0.1305	96.0	10.88%	4324.0	9.16%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-1	-3.090e+00	0.1305	10.0	1.13%	286.2	0.61%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-1	-3.054e+00	0.1342	40.0	4.54%	1617.1	3.42%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-3.021e+00	0.1376	155.0	17.57%	7308.1	15.48%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.999e+00	0.1396	27.0	3.06%	1024.2	2.17%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-2.861e+00	0.1590	11.0	1.25%	339.9	0.72%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-2.830e+00	0.1627	56.0	6.35%	2413.3	5.11%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-1	-2.828e+00	0.1627	11.0	1.25%	341.4	0.72%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-2.827e+00	0.1627	214.0	24.26%	10395.0	22.01%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-1	-2.749e+00	0.1725	21.0	2.38%	779.1	1.65%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-2.665e+00	0.1864	2.0	0.23%	23.2	0.05%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-2.639e+00	0.1898	86.0	9.75%	3926.1	8.31%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-1	-2.631e+00	0.1899	1.0	0.11%	4.0	0.01%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-1	-2.491e+00	0.2168	183.0	20.75%	8903.2	18.86%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-1	-2.481e+00	0.2175	35.0	3.97%	1460.2	3.09%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-2.478e+00	0.2175	93.0	10.54%	4314.5	9.14%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-2.430e+00	0.2258	37.0	4.20%	1563.3	3.31%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-1	-2.400e+00	0.2308	76.0	8.62%	3481.3	7.37%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.381e+00	0.2337	3.0	0.34%	57.1	0.12%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-1	-2.315e+00	0.2481	23.0	2.61%	917.5	1.94%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-2.280e+00	0.2551	7.0	0.79%	210.5	0.45%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.263e+00	0.2558	5.0	0.57%	133.0	0.28%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-2.263e+00	0.2558	5.0	0.57%	133.0	0.28%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.238e+00	0.2605	24.0	2.72%	973.5	2.06%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.238e+00	0.2605	105.0	11.90%	4983.7	10.55%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.207e+00	0.2653	28.0	3.17%	1166.8	2.47%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-2.203e+00	0.2653	40.0	4.54%	1744.1	3.69%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.106e+00	0.2897	5.0	0.57%	139.5	0.30%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-2.079e+00	0.2957	11.0	1.25%	394.7	0.84%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.071e+00	0.2959	4.0	0.45%	102.4	0.22%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-2.038e+00	0.3040	34.0	3.85%	1480.6	3.14%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.029e+00	0.3049	16.0	1.81%	625.3	1.32%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.009e+00	0.3090	66.0	7.48%	3071.7	6.51%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-2.006e+00	0.3090	7.0	0.79%	226.3	0.48%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.004e+00	0.3090	17.0	1.93%	674.3	1.43%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-1.975e+00	0.3138	1.0	0.11%	8.1	0.02%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.938e+00	0.3237	9.0	1.02%	317.7	0.67%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.924e+00	0.3261	6.0	0.68%	189.8	0.40%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.914e+00	0.3273	11.0	1.25%	408.7	0.87%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.910e+00	0.3273	38.0	4.31%	1698.6	3.60%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.904e+00	0.3273	65.0	7.37%	3046.4	6.45%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.902e+00	0.3273	20.0	2.27%	827.1	1.75%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.894e+00	0.3273	41.0	4.65%	1849.3	3.92%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.852e+00	0.3381	19.0	2.15%	786.4	1.67%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.824e+00	0.3456	21.0	2.38%	885.6	1.88%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.817e+00	0.3459	14.0	1.59%	555.4	1.18%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.776e+00	0.3583	6.0	0.68%	198.3	0.42%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.769e+00	0.3588	30.0	3.40%	1330.1	2.82%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.728e+00	0.3717	9.0	1.02%	334.3	0.71%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.695e+00	0.3818	41.0	4.65%	1889.7	4.00%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.685e+00	0.3836	15.0	1.70%	617.7	1.31%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.662e+00	0.3902	27.0	3.06%	1201.9	2.55%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.653e+00	0.3917	41.0	4.65%	1898.3	4.02%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.629e+00	0.3987	45.0	5.10%	2104.7	4.46%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.628e+00	0.3987	30.0	3.40%	1355.5	2.87%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.605e+00	0.4039	1.0	0.11%	12.3	0.03%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.596e+00	0.4054	33.0	3.74%	1510.7	3.20%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.585e+00	0.4076	5.0	0.57%	167.4	0.35%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.539e+00	0.4246	85.0	9.64%	4170.3	8.83%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.532e+00	0.4253	30.0	3.40%	1373.1	2.91%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.523e+00	0.4268	5.0	0.57%	171.1	0.36%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.493e+00	0.4373	21.0	2.38%	934.4	1.98%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.486e+00	0.4382	12.0	1.36%	498.5	1.06%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.473e+00	0.4413	55.0	6.24%	2650.7	5.61%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.462e+00	0.4441	16.0	1.81%	694.8	1.47%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.460e+00	0.4441	13.0	1.47%	549.3	1.16%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.440e+00	0.4491	36.0	4.08%	1693.3	3.59%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.438e+00	0.4491	76.0	8.62%	3739.9	7.92%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.436e+00	0.4491	13.0	1.47%	552.9	1.17%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.433e+00	0.4491	16.0	1.81%	698.8	1.48%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.410e+00	0.4532	11.0	1.25%	459.5	0.97%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.389e+00	0.4606	9.0	1.02%	366.2	0.78%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.372e+00	0.4664	16.0	1.81%	707.8	1.50%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.372e+00	0.4664	19.0	2.15%	856.0	1.81%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.356e+00	0.4690	7.0	0.79%	275.2	0.58%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-1.339e+00	0.4744	36.0	4.08%	1716.2	3.63%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.330e+00	0.4766	15.0	1.70%	664.1	1.41%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.325e+00	0.4766	53.0	6.01%	2589.6	5.48%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.302e+00	0.4855	1.0	0.11%	17.2	0.04%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.280e+00	0.4937	23.0	2.61%	1071.4	2.27%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.264e+00	0.4993	3.0	0.34%	99.3	0.21%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.247e+00	0.5051	18.0	2.04%	826.9	1.75%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.241e+00	0.5057	27.0	3.06%	1281.5	2.71%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.237e+00	0.5057	24.0	2.72%	1130.1	2.39%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.235e+00	0.5057	6.0	0.68%	239.8	0.51%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.235e+00	0.5057	29.0	3.29%	1384.7	2.93%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.230e+00	0.5057	58.0	6.58%	2876.8	6.09%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.218e+00	0.5057	16.0	1.81%	731.5	1.55%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.216e+00	0.5057	13.0	1.47%	582.4	1.23%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.213e+00	0.5057	32.0	3.63%	1542.5	3.27%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.201e+00	0.5069	9.0	1.02%	387.9	0.82%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.179e+00	0.5161	30.0	3.40%	1448.3	3.07%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.175e+00	0.5161	13.0	1.47%	588.6	1.25%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.174e+00	0.5161	29.0	3.29%	1398.7	2.96%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.173e+00	0.5161	7.0	0.79%	293.6	0.62%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.167e+00	0.5161	123.0	13.95%	6297.7	13.34%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.137e+00	0.5262	4.0	0.45%	153.4	0.32%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.133e+00	0.5262	38.0	4.31%	1871.4	3.96%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.130e+00	0.5262	6.0	0.68%	249.1	0.53%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.125e+00	0.5262	1.0	0.11%	21.1	0.04%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.125e+00	0.5262	1.0	0.11%	21.2	0.04%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.124e+00	0.5262	14.0	1.59%	646.3	1.37%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.107e+00	0.5276	5.0	0.57%	203.7	0.43%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.099e+00	0.5296	27.0	3.06%	1313.2	2.78%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.084e+00	0.5352	3.0	0.34%	110.8	0.23%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.067e+00	0.5423	23.0	2.61%	1115.9	2.36%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.041e+00	0.5539	14.0	1.59%	660.1	1.40%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.038e+00	0.5539	22.0	2.49%	1070.2	2.27%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.035e+00	0.5539	42.0	4.76%	2107.9	4.46%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.028e+00	0.5539	11.0	1.25%	510.3	1.08%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-9.551e-01	0.5935	1.0	0.11%	26.8	0.06%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-9.338e-01	0.6037	7.0	0.79%	321.2	0.68%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-9.034e-01	0.6197	61.0	6.92%	3151.7	6.67%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-8.846e-01	0.6288	4.0	0.45%	175.5	0.37%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-8.794e-01	0.6295	2.0	0.23%	76.4	0.16%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-8.566e-01	0.6413	15.0	1.70%	747.8	1.58%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-8.485e-01	0.6439	3.0	0.34%	128.3	0.27%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-8.431e-01	0.6446	10.0	1.13%	489.8	1.04%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-8.300e-01	0.6505	13.0	1.47%	648.2	1.37%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-8.217e-01	0.6532	1.0	0.11%	32.0	0.07%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-8.176e-01	0.6533	16.0	1.81%	808.2	1.71%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-7.937e-01	0.6663	8.0	0.91%	393.5	0.83%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-7.920e-01	0.6663	31.0	3.51%	1607.8	3.41%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-7.833e-01	0.6679	65.0	7.37%	3416.8	7.24%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-7.639e-01	0.6783	60.0	6.80%	3159.4	6.69%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-7.599e-01	0.6783	11.0	1.25%	557.9	1.18%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-7.519e-01	0.6810	43.0	4.88%	2259.8	4.79%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-7.462e-01	0.6822	4.0	0.45%	190.1	0.40%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-7.433e-01	0.6822	5.0	0.57%	243.8	0.52%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-7.345e-01	0.6848	7.0	0.79%	350.1	0.74%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-7.067e-01	0.7013	11.0	1.25%	568.9	1.20%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-6.993e-01	0.7038	27.0	3.06%	1425.7	3.02%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-6.985e-01	0.7038	7.0	0.79%	356.7	0.76%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-6.886e-01	0.7059	65.0	7.37%	3463.5	7.33%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-6.820e-01	0.7078	95.0	10.77%	5073.1	10.74%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-6.765e-01	0.7090	1.0	0.11%	38.6	0.08%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-6.759e-01	0.7090	3.0	0.34%	145.9	0.31%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-6.759e-01	0.7090	3.0	0.34%	145.1	0.31%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-6.663e-01	0.7090	4.0	0.45%	200.5	0.42%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-6.546e-01	0.7138	33.0	3.74%	1763.1	3.73%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-6.531e-01	0.7138	7.0	0.79%	364.7	0.77%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-6.513e-01	0.7138	4.0	0.45%	202.2	0.43%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.469e-01	0.7138	6.0	0.68%	311.6	0.66%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-6.458e-01	0.7138	5.0	0.57%	257.4	0.55%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-6.338e-01	0.7153	9.0	1.02%	477.0	1.01%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-6.324e-01	0.7153	21.0	2.38%	1125.2	2.38%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-6.208e-01	0.7194	59.0	6.69%	3177.2	6.73%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-6.194e-01	0.7194	170.0	19.27%	9140.0	19.36%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-6.091e-01	0.7225	1.0	0.11%	42.2	0.09%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-6.016e-01	0.7253	9.0	1.02%	483.1	1.02%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-5.846e-01	0.7350	2.0	0.23%	100.6	0.21%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-5.842e-01	0.7350	43.0	4.88%	2333.8	4.94%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-5.538e-01	0.7526	14.0	1.59%	769.0	1.63%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-5.534e-01	0.7526	82.0	9.30%	4458.6	9.44%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-5.532e-01	0.7526	6.0	0.68%	328.5	0.70%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.493e-01	0.7526	4.0	0.45%	217.5	0.46%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-5.297e-01	0.7600	63.0	7.14%	3446.3	7.30%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-4.983e-01	0.7815	37.0	4.20%	2050.1	4.34%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-4.967e-01	0.7815	11.0	1.25%	620.2	1.31%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.868e-01	0.7850	19.0	2.15%	1067.9	2.26%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.682e-01	0.7969	4.0	0.45%	231.2	0.49%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-4.574e-01	0.8028	2.0	0.23%	115.8	0.25%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-4.472e-01	0.8082	26.0	2.95%	1471.1	3.12%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-4.357e-01	0.8147	2.0	0.23%	118.5	0.25%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-4.255e-01	0.8202	3.0	0.34%	180.3	0.38%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-4.186e-01	0.8230	28.0	3.17%	1596.3	3.38%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-4.151e-01	0.8230	2.0	0.23%	121.4	0.26%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.123e-01	0.8230	8.0	0.91%	475.1	1.01%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-3.957e-01	0.8335	5.0	0.57%	305.8	0.65%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-3.780e-01	0.8455	28.0	3.17%	1618.3	3.43%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.743e-01	0.8458	29.0	3.29%	1676.0	3.55%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-3.725e-01	0.8458	16.0	1.81%	946.9	2.01%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-3.681e-01	0.8458	13.0	1.47%	778.0	1.65%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-3.650e-01	0.8458	23.0	2.61%	1345.6	2.85%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-3.338e-01	0.8690	34.0	3.85%	1981.1	4.20%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-3.332e-01	0.8690	82.0	9.30%	4639.8	9.83%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.259e-01	0.8701	6.0	0.68%	384.3	0.81%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-3.255e-01	0.8701	16.0	1.81%	968.6	2.05%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-3.228e-01	0.8701	21.0	2.38%	1255.0	2.66%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-2.932e-01	0.8901	80.0	9.07%	4571.5	9.68%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.832e-01	0.8961	2.0	0.23%	145.8	0.31%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-2.489e-01	0.9244	25.0	2.83%	1532.2	3.24%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-2.457e-01	0.9244	2.0	0.23%	154.2	0.33%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-2.440e-01	0.9244	47.0	5.33%	2786.9	5.90%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.438e-01	0.9244	107.0	12.13%	6123.2	12.97%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-2.411e-01	0.9244	32.0	3.63%	1939.3	4.11%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-2.404e-01	0.9244	7.0	0.79%	477.5	1.01%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-2.381e-01	0.9244	2.0	0.23%	156.6	0.33%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-2.307e-01	0.9244	8.0	0.91%	543.7	1.15%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.265e-01	0.9244	10.0	1.13%	667.0	1.41%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-2.249e-01	0.9244	37.0	4.20%	2239.2	4.74%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.196e-01	0.9244	3.0	0.34%	230.7	0.49%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-2.003e-01	0.9369	2.0	0.23%	167.8	0.36%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.898e-01	0.9438	25.0	2.83%	1582.9	3.35%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.776e-01	0.9524	52.0	5.90%	3147.2	6.67%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.745e-01	0.9524	57.0	6.46%	3435.8	7.28%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.735e-01	0.9524	63.0	7.14%	3776.8	8.00%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.678e-01	0.9529	57.0	6.46%	3445.7	7.30%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.675e-01	0.9529	26.0	2.95%	1663.8	3.52%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.648e-01	0.9529	15.0	1.70%	1012.3	2.14%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.561e-01	0.9552	34.0	3.85%	2144.0	4.54%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.558e-01	0.9552	2.0	0.23%	183.9	0.39%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.450e-01	0.9599	20.0	2.27%	1332.1	2.82%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.215e-01	0.9798	9.0	1.02%	678.5	1.44%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.205e-01	0.9798	4.0	0.45%	346.6	0.73%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.183e-01	0.9798	82.0	9.30%	4953.3	10.49%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.129e-01	0.9798	31.0	3.51%	2029.4	4.30%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.035e-01	0.9856	1.0	0.11%	124.7	0.26%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-9.953e-02	0.9866	11.0	1.25%	829.7	1.76%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-8.674e-02	0.9963	1.0	0.11%	133.1	0.28%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-8.620e-02	0.9963	3.0	0.34%	299.7	0.63%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-8.420e-02	0.9963	51.0	5.78%	3260.9	6.91%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-8.031e-02	0.9963	11.0	1.25%	854.3	1.81%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-5.521e-02	1.0000	3.0	0.34%	331.6	0.70%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-4.603e-02	1.0000	7.0	0.79%	642.6	1.36%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.534e-02	1.0000	28.0	3.17%	2001.8	4.24%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.210e-02	1.0000	12.0	1.36%	993.6	2.10%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-4.148e-02	1.0000	14.0	1.59%	1127.7	2.39%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-3.507e-02	1.0000	7.0	0.79%	667.8	1.41%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-3.504e-02	1.0000	1.0	0.11%	180.1	0.38%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.126e-02	1.0000	21.0	2.38%	1666.7	3.53%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.726e-02	1.0000	61.0	6.92%	4167.4	8.83%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.714e-02	1.0000	6.0	0.68%	655.3	1.39%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.684e-02	1.0000	14.0	1.59%	1229.6	2.60%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.478e-02	1.0000	8.0	0.91%	818.9	1.73%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.164e-02	1.0000	4.0	0.45%	525.7	1.11%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.839e-03	1.0000	5.0	0.57%	744.2	1.58%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.120e-04	1.0000	41.0	4.65%	3474.5	7.36%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.000e-06	1.0000	40.0	4.54%	4054.0	8.59%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	72.6	0.15%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	0.000e+00	1.0000	0.0	0.00%	274.4	0.58%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	85.4	0.18%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	30.3	0.06%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	67.2	0.14%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	180.9	0.38%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	42.1	0.09%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	216.1	0.46%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	40.9	0.09%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	28.2	0.06%