p-value: | 1e-13 |
log p-value: | -3.049e+01 |
Information Content per bp: | 1.853 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 44.8 +/- 30.6bp |
Average Position of motif in Background | 30.6 +/- 23.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTTTGTTR CCCCCTGCTGTG--- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTTTGTTR TNTCCTGCTGTGNNG |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTTTGTTR NNTCCTGCTGTGNNN |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTTTGTTR TCNCCTGCTGNGNNN |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCTGCTTTGTTR GGCCYCCTGCTGDGH-- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCCTGCTTTGTTR -CCTGCTGAGH-- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCTGCTTTGTTR GACCCCCCGCTGTG--- |
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PB0084.1_Tcf7l2_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCCTGCTTTGTTR---- ATTTCCTTTGATCTATA |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCCTGCTTTGTTR- ----CCTTTGATGT |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCCTGCTTTGTTR---- NNNTCCTTTGTTCTNNN |
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