Information for 8-TAATTGGATT (Motif 4)

G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T
Reverse Opposite:
C G T A G T C A A C G T A T G C A G T C G C T A C T G A A C G T A C G T C T G A
p-value:1e-16
log p-value:-3.782e+01
Information Content per bp:1.854
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.9 +/- 25.0bp
Average Position of motif in Background51.1 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2b/MA0681.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TAATTGGATT-
TAATTAAATTA
 G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGATT-
GTAATCDGATTA
 A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TAATTGGATT-
TAATTAAATTA
 G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TAATTGGATT-
YTAATYNRATTA
 A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TAATTGGATT--
TAATTNVATTAN
 G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TAATTGGATT-
TAATTAAATTA
 G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T A C G T
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGATT
NTAATTGG---
 A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGATT
NTAATTGG---
 A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGATT
NTAATTGG---
 A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGATT
NNTAATTAGA--
 A C G T A C G T G A C T C G T A C G T A A G C T C G A T C T A G A T C G C G T A A C G T C G A T
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T