Information for 10-CATTTTTACTGTG (Motif 12)

A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
Reverse Opposite:
G T A C C T G A G T A C C G T A A C T G A G C T C G T A C G T A C T G A C G T A C G T A A C G T A T C G
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.9 +/- 28.5bp
Average Position of motif in Background61.7 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.3/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATTTTTACTGTG
TCCATGTTTACTTTG
 A C G T A C G T A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CATTTTTACTGTG-
--TGTTTACTTAGG
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATTTTTACTGTG-
BSNTGTTTACWYWGN
 A C G T A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTTTTACTGTG
--TGTTTACTTT-
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CATTTTTACTGTG
--TRTTTACTTW-
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTTTTACTGTG
--TGTTTACTTT-
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATTTTTACTGTG
-ATGTTTAC----
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATTTTTACTGTG
ATGCATAATTAATGAG
 A C G T A C G T A C G T A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATTTTTACTGTG
ATGCATAATTAATGAG
 A C G T A C G T A C G T A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATTTTTACTGTG
-ATATTTACATA-
 A T G C C G T A A C G T G A C T A G C T A C G T A C G T T C G A G T A C C G A T A C T G A G C T A C T G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T