Information for 10-CGTCAGTGAG (Motif 10)

A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
Reverse Opposite:
A G T C A C G T A T G C C G T A A T G C A G C T A C T G G T C A A T G C A T C G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.872
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.7 +/- 17.2bp
Average Position of motif in Background45.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGTGAG
ACGTCA-----
 A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAGTGAG---
CACGGCAGTTGGTNN
 A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAGTGAG
TACGTCAT----
 A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAGTGAG
TGACGTCA-----
 A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTCAGTGAG---
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAGTGAG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGTCAGTGAG--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGTCAGTGAG
NTTATTCGTCATNC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGTGAG
SCTGTCAVTCAV
 A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGTCAGTGAG-------
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A T G C A T C G A C G T A G T C C T G A A T C G A C G T A T C G T G C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G