Information for 9-GGSTCASTTTGWA (Motif 7)

A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
Reverse Opposite:
A C G T C G A T A G T C C G T A C G T A C G T A A T C G A C G T A T C G C G T A A T C G A T G C A G T C
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 14.0bp
Average Position of motif in Background72.3 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGSTCASTTTGWA
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GGSTCASTTTGWA----
-------TTTGAAACCG
 A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGSTCASTTTGWA--
------ATTTGAATT
 A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGSTCASTTTGWA
CTCCAGGGGTCAATTGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGSTCASTTTGWA
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGSTCASTTTGWA-
NAGGTCACNNTGACC
 A C G T A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGSTCASTTTGWA--
AGGTCACCCTGACCT
 A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGSTCASTTTGWA--
BAGTCATANTGAAAG
 A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGSTCASTTTGWA
AGGTCA-------
 A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGSTCASTTTGWA
AGRGGTCA-------
 A C G T A C G T A C T G A T C G A T G C C G A T A T G C C G T A T A G C C G A T A C G T A C G T A C T G G C T A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T